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It doesn't matter, just make sure to be consistent. Use the same system,
the same computer setup, and the same system version, etc. Analyzing data
in parallel is always recommended with large sample sizes like yours
** External Email - Caution **
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Thank you for your response. My next question is regarding the analysis
process. I am curious to know if there is any difference between analyzing
one specific subject and analyzing multiple subjects in parallel. For
instance, if I am working on 1000 subjects, would it make a difference in
the volumetric results if I analyze all of them at once in parallel or
break them down into smaller groups to analyze? I would greatly appreciate
your help with this.
Thank you and Best Regards,
Yunus.
--------------------------------------------------------------------------------
*Yunus Soleymani*
*Ph.D. Candidate of Neuroimaging *
*Tehran University of Medical Sciences*
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+98 914 526 9298
--------------------------------------------------------------------------------
On Saturday, October 14, 2023 at 03:29:11 PM GMT+3:30, John Anderson <
jb19790...@gmail.com> wrote:
External Email - Use Caution
- FreeSurfer 5.3 QA Tools *MailScanner has detected a possible fraud
attempt from "secure-web.cisco.com" claiming to be*
https://secure-web.cisco.com/1pVeXzPnGpx6B2fKOoBmW3MHav95756yrRMgP7HJh6IJKUy_VZQaPp6GJnw2JAvQoDj5gTYW_pA3hBo7m3SdCoB0eb73C6ki7QLwUxeFqos3a_Gb5BdC3DJI3puXmUP8nMWPZEb3DuC_ZAeJeRrUwKA-tHy3XNatsVA2117yzFlwmVVBUQXDiiPAXCTi0vQh6l1FXnlZ-yYK8uwZMPstsC33gP3m44L0hy2i4tLZjCS3kPwwqVbxrVu0OzmoW6uwkAe_WnMd5S_VxP1hryiCwtUH0C3G_W2SCmcqKV_1r1hJoVTRy_XywcmRaM8Vw9vA6GZW1tmOAmUTBUt9ItWk5TOh0XYuoa_Y847bgrSvpAgQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FQATools
<https://secure-web.cisco.com/1X4SVtjfuS9P5wjtYNSZeaPs3CnIXR07prqwkfcNvWh2rB5_nwrU1OGFg8E16ZQ6BYf1B_7FUdMQbL3N-oIiUNQX5DyZzzSII8DlbEdxscWfmbN6jqT-VSYL2AC5l7WyBe2ZUaVkeSIdfNlXStpYlaLtUoGG4dhUfXx58NL30YHc_3wkDRPq8xk_vQpikoN6gHaCi3otxHh6SF3G6fxBqe9hg4jNYW5xx8RHgCl3h1Yh2XfYgfiPLJeQCLu3XnMQQj6RRvBn2zsTEKq_OU3AtB3uqvM-PcdFF2E3ZkzTGdZD4Qhir2879446Hcxyd0qUH-QdVvZltdOmO5Izj_pPR2wH1SziuRUgiEbZ0KCqftgI/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fsecure-web.cisco.com%2F1xhhgMhrQlSBmGkb8NMn06KLlNRaz3DnQ7vzdZdQzrqjoeDsU5-gpo8VaUCxtX79W2O5j9rC87MnVFoBXzpHmSrCDzkZXGGR7I_PmSZlic0yw_BJBu2NDNAuQxkdpXtMPVHqiMbinZ5ak8HWwws2ZWPYgfTlbVjDSje40bRgu0R5XIZ3hox3WQjltQwACheB5Jq32Mma-tb_TqdU4lsjmK09zly52yDwCAHO5fRp45UbD9lyo45IyXqFzNllJDwqW-nV1LmciahyfMxkeRoIhvFEjQvJopXYiXVMQZipMiNsF89zddc8O_x38B-Stc-cn3pKMhb5WTqfyKepybZXKSqs6FQMvc7XUNsSo3yAoaSs%2Fhttps*3A*2F*2Fsurfer.nmr.mgh.harvard.edu*2Ffswiki*2FQATools__;JSUlJSU!!NZvER7FxgEiBAiR_!q-NbuKT23td_9o4DVH6jwPBlnCTPblT-heTmAHOlh6z6ucR3zZIfrZ4zbIojHZWpC28OyCiJjDFgI-IJC6-Qp_YtDOe9CqExedn8rEazxpE$>
- For versions 7+, use the following executable to compute QA stats
*MailScanner
has detected a possible fraud attempt from "secure-web.cisco.com" claiming
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https://secure-web.cisco.com/1jd8feriFIfOfhz3QosHn2W2rk3OOeZUuj0X0RpNnshuDmdXJeZTW2nDv7rPOZxlDkHntzz-CVBt2w4KwWRWzDDxma4Q391vvg7LYTp5x030xJbQVCYgoOhIGnUsdT0yBq4R3Q_4y4__ydXsJVGi1ARv0bFO0Q7qrWuUvqRtlq5CHPxreB1jOGQ2RM2wDnVvd9FY91jAPMqdXjzTDAHPT5SVYQeRx7YTAAVL0rdA-239pP2ObfMJfQdayXqL_aCu5eQd39W_AkcIdqaXywEDy-WTwo3n7YYWlIjYW_D-ao3jJgjy_iDQoaCfh4SwqPJCFpJtxV8qkR-7fuvPb9AbC61uzVKcGtwjoMnrUt9X2JEI/https%3A%2F%2Fgithub.com%2FDeep-MI%2Ffsqc
<https://secure-web.cisco.com/1sirjJxRdaG_LwsFc9BxcTnKi2u4q_K765ccWgFzszfd7xNZNgo-sX0Hhe5AbpqWoA3lzKTw3-mW0ATYfoxUui9UMMw18bddpmLvjE6YFHznylD1n4lO8IvtuBLljmxpLLkLhgUL6xgnHK963eWEr-JlkOCmcLYeLDvVtZuuBXabn5e50MgL_dMoAHtotVTLRDkQpxnRH93l1_b3Nk0WSQfWM9jtWi0IgxWAy7Pvcgtx3vcyyGC84PzZSpewNsxZhFAiA9tACt5jVlZe65t7rLiu5nFm1jOWU6tEiWSnWf2G0iwTuHPR4kAhTTW5nbTMgHEYcBcdZJYwU3-iJvOEEK5Ppn-i-4VJwwV30d-xQD6A/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fsecure-web.cisco.com%2F176EEDJE8rR684nmHeoPJAc8XhajsuDydGl4DaVSEQrq7SFq6berFEZvvOdBTdao2mTaLlsLbU-w8g5Dp_665W5VCUWfLiNclcg0KGiypCKQUvy4TGV_tkCZwf--67mFfszR5qBeBwZPULZs3PKZ7CFx8Kzlk9wJZG3VXdeKhD4OxGTYzCHEGXC_kU5OIEhETXbAouQJz7T3F3a1zdXc8w3AFmgNePUHEt6NxeiHtftxbrkOXTcP62a3VrFvnxTrOKTCuMi6PwyLJUveVXKrsYBjxeK3tbvFmc2TGfHx0EMpV4TW_MqtNBnNQM6Vjl9KD1EH7RVEVrMGX1Vlh3McyA6xERxZhnerg3YM1tBMSCgg%2Fhttps*3A*2F*2Fgithub.com*2FDeep-MI*2Ffsqc__;JSUlJSU!!NZvER7FxgEiBAiR_!q-NbuKT23td_9o4DVH6jwPBlnCTPblT-heTmAHOlh6z6ucR3zZIfrZ4zbIojHZWpC28OyCiJjDFgI-IJC6-Qp_YtDOe9CqExedn8HQb95H8$>
Be aware that there are NO alternatives to visual inspection
------------------------------
*From:* freesurfer-boun...@nmr.mgh.harvard.edu <
freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of yunus soleymani <
soleymani.yu...@yahoo.com>
*Sent:* Saturday, October 14, 2023 3:18 AM
*To:* freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
*Subject:* [Freesurfer] data quality check before analysis [EXTERNAL]
** External Email - Caution **
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Hi there,
My name is Yunus and I'm currently working on my Ph.D. thesis, which
involves analyzing the HCP database volumetrically using Freesurfer.
However, before I begin with the software, I was wondering if there is a
tool in Freesurfer that can perform a quality check on the data to identify
any possible artifacts or noise that might affect the analysis.
Could you please let me know if such a tool exists in Freesurfer? Your help
would be much appreciated.
Thank you and Best Regards,
Yunus.
--------------------------------------------------------------------------------
*Yunus Soleymani*
*Ph.D. Candidate of Neuroimaging *
*Tehran University of Medical Sciences*
*MailScanner has detected a possible fraud attempt from
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MailScanner has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be MailScanner has detected a
possible fraud attempt from "secure-web.cisco.com" claiming to be
MailScanner has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be MailScanner has detected a
possible fraud attempt from "secure-web.cisco.com" claiming to be
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<https://secure-web.cisco.com/1vR7NCYmqBwGE_G8pzm1u82Wa_EkUO5zL8AcqJzRj5XPNDv_gr54KGZGax0LZtXml7twQzfJutrFtCwXNwzmam5nCTj8uzEWQjiX0d97yS2smu_9shulMQEI_pp5ERgDfEy53FaB8DyERUHKy6dlCilHIPA6hC8rHHLAHrZNYMLVO3ugQwNpzVuZW79Vdb4-EZyHAEYVQ9uXvyZ6l56nk0Pc_NSe8JTLUg1ds3ZLLt0bWU06pJ04YC4BB0uMKJboXxn0tXSe41AkmIqBlXSmJPsBiiyxw_Mm8P4Eq9UMvVuAc50vfPo5GHK9ieLIjiATX1nKuOukod2J980szzyjoMwElcFTmKi9ZlUPZiIr3kvI/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fsecure-web.cisco.com%2F1ONx64KwoPMgitDZExVqBSsqddsptyP4F1pqm-0bs2KILBsI-ZUzyzUvMF1kgNBf_YRm5XgnF9C0SjhXBMvOq4F5U-Brep5Rwc1IdhN7sMTU9dWZeXvqWCpNME_btFAr1ImvNN3mX-XUkG9fRHUpbhLCVGTSUCB5jhll1dTeJV0WX_reU-_KWsBE4MHwltC3NGLJTn01glaWcaQeCtYsAr2XP0uO11m4AUpsOheJwrZJ7zrS4v7p-zKOOk0mXpLtZyyYWXF5hazV1iYk2bEBXhDz8N9sFVekkfyspobLWbAWujPAZxClBmJi646Xf24l_DsuTjmBDX5SYlYvyhw7C7W5mXeJcVDtDdgArUuT06Ek%2Fhttps*3A*2F*2Furldefense.com*2Fv3*2F__http*3A*2F*2Fsecure-web.cisco.com*2F1ZQGvToQhTy-7a1VY-6NFgGSbFLn2HY7nSawP6UX6nSoyhBvB8A57SHrn0AX74k6iTdEB_gHiXC1Hw79mJx-2V0qd7A5IsUZUjmi1CC3VTIuwhfy9gQ3PeY00c9z8sk6kFqGa8QSVAcEvqz5cTa0FsoAPviJ1jxBPpwRYFN0E2bYVEykIgqg9TMnHYIIx2PVkYhINSjV2Y4nusrHpL0yUcXw2J2w6q83JRFO439WUSL7TG0gutSBySwtHBPUv7wCrhjpOgpBOpWTreSZ4AlMOyjCAQZrpsE2R_NuFZwhorx3PSgLX6snKtUIe2UZKuSXhTsg43dECPtzoYpPC1gbKDA*2Fhttp*2A3A*2A2F*2A2Fwww.yahoo.com__*3BJSUl*21*21NZvER7FxgEiBAiR_*21vXild0BITbWt0tIHT8BkodzE_Eh6X-_IzNlTYVoBQEN2GFMMjCzUOtyZFMJsFui7oFuLBDJHRTJXfGi-ijALgdV0RUQ6qejJBo6s9JVr9ec*24__;JSUlJSUlJSUlJSUlJSUlJSUl!!NZvER7FxgEiBAiR_!q-NbuKT23td_9o4DVH6jwPBlnCTPblT-heTmAHOlh6z6ucR3zZIfrZ4zbIojHZWpC28OyCiJjDFgI-IJC6-Qp_YtDOe9CqExedn8E2n4vW0$>*
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