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Hi,
I experienced issues with segmentation (exclusion of large portion of 
cerebellum) and so used SynthSeg in Matlab (as the built-in mri_synthseg in 
freesurfer wasn’t working on my computer) to create the segmentation. Does 
anyone know how to import the resultant 3D categorical array containing the 
labels back into freesurfer (for the sake of further manipulating it in 
freeview and replacing the aseg file)?

Best,
Haley

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