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tkregister2 is pretty old at this point; try using tkregsiterfv with the
same option.
On 7/20/2023 7:06 PM, Viktorija Pratuseviciute wrote:
External Email - Use Caution
Hello,
We are trying to process a scan with a failed talairach. We have been
able to visualize the misalignment and attempted to use the following
command (tkregister2 --s PI163 –fstal) to manual adjust the
talairach.xfm based on the tutorial (FsTutorial/Talairach_freeview).
The tkregister2 GUI opens up, however only certain functions work: I
can switch between target and moveable, I can also double click on
sliding scales to switch coronal, saggital and horizontal views,
however I am not able to move any of the sliders including the rotate
or translate brain and hence unable to fix the talairach. Is there a
way to fix this issue? Or an alternative way to fix the bad talairach
output?
We are using freesurfer/7.3.1 and have attempted the command on our
server command line on both mac and windows with same results.
Many thanks,
Viki
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