External Email - Use Caution
You could also try directly sourcing the FS-711 like this:
if using bash: source /usr/local/freesurfer/nmr-stable711-env-bash
if using csh: source /usr/local/freesurfer/nmr-stable711-env
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Huang, Yujing
<yhuan...@mgh.harvard.edu>
Sent: Tuesday, May 2, 2023 11:24 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Error Sourcing Freesurfer
External Email - Use Caution
Hi Isabella,
‘fs-stable711-env-autoselect’ should be the string passed to fsenv script.
For example, to source 7.2.0 release:
If you are using csh: source /cluster/freesurfer/fsenv.csh 7.2.0
If you are using bash: source /cluster/freesurfer/fsenv.sh 7.2.0
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Turco, Isabella
Sent: Tuesday, May 2, 2023 10:55 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Error Sourcing Freesurfer
External Email - Use Caution
Hello,
When trying to source Freesurfer version 7.1.1 using the command below, I’m
getting the error “No such file or directory.”
source /usr/local/freesurfer/fs-stable711-env-autoselect
Any guidance on potential solutions would be much appreciated!
Thanks,
Isabella
Isabella Turco, B.S.
Senior Clinical Research Coordinator
Massachusetts General Hospital
Department of Anesthesia, Critical Care and Pain Medicine
617-643-2896
itu...@mgh.harvard.edu<mailto:itu...@mgh.harvard.edu>
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