External Email - Use Caution
do you mean you want a list of vertices and their uncorrected p-values
from a given cluster that is significant after corrections for multiple
comparisons? The easiest way is probably matlab, eg
ocn = MRIread('ocn.mgh');
ind = find(ocn.vol == YourClusterNumber);
sig = MRIread('sig.mgh');
sigsInYourCluster = sig.vol(ind)
On 4/19/2023 4:07 AM, Akansha Mahesh Naraindas wrote:
> External Email - Use Caution
>
> Hi
> I have run a GLM using cortical thickness and a behavioural measure on
> specific ROIs,
> I have a query about extracting the statistical values, specifically the test
> statistic from the significant regions after running the GLM but prior to
> multiple comparison correction. Is there any way to extract the test
> statistic of each vertex of the significant regions?
>
> Thanks
> Akansha
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://secure-web.cisco.com/1CwSaKBJ88D6kYGxVMFpuv8S81q3uDrT8rKHhFl30oXWXhgx1YT4vV3AK9zXitbtRD06VnTJWXKolZ1uN5krPMCgDGUDiwutal9jhzL9aK-WhfdsEE8aoBJdunzgeE0u9UKjRYdq0D7FfB6nsbPnXBDOkMmzbeqsE29kxH0fEYqcFkFWcMvxaGkbeJ4-Zv92yyqZdNKd78YoDY8ij7U3lKI0fxc_en6a3qlbz20cji-jJ-k-wUxlxlTo289VxnqaR/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.
