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Hi:
I installed the 22 march freesurfer developer version. I test
mri_synthseg with a CT image, but it shows me the following error:
"mri_synthseg --i /home/developer/Documents/sub-0001/H2.nii.gz --o
/home/developer/Documents/sub-0001 --cpu --ct
Traceback (most recent call last):
File "/usr/local/freesurfer/7-dev/python/scripts/mri_synthseg", line 22,
in <module>
import tensorflow as tf
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/tensorflow/__init__.py",
line 479, in <module>
keras._load()
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/tensorflow/python/util/lazy_loader.py",
line 45, in _load
module = importlib.import_module(self.__name__)
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/importlib/__init__.py",
line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/__init__.py",
line 25, in <module>
from keras import models
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/models/__init__.py",
line 18, in <module>
from keras.engine.functional import Functional
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/engine/functional.py",
line 25, in <module>
from keras.engine import base_layer
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/engine/base_layer.py",
line 43, in <module>
from keras.mixed_precision import loss_scale_optimizer
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/mixed_precision/loss_scale_optimizer.py",
line 20, in <module>
from keras.optimizer_v2 import optimizer_v2
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/keras/optimizer_v2/optimizer_v2.py",
line 36, in <module>
keras_optimizers_gauge = tf.__internal__.monitoring.BoolGauge(
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/tensorflow/python/eager/monitoring.py",
line 360, in __init__
super(BoolGauge, self).__init__('BoolGauge', _bool_gauge_methods,
File
"/usr/local/freesurfer/7-dev/python/lib/python3.8/site-packages/tensorflow/python/eager/monitoring.py",
line 135, in __init__
self._metric = self._metric_methods[self._label_length].create(*args)
tensorflow.python.framework.errors_impl.AlreadyExistsError: Another metric
with the same name already exists."
Which could be the problem ?
Sincerely,
Gonzalo Rojas Costa
Department of Radiology
Clínica las Condes
Lo Fontecilla 441, Las Condes, Santiago, Chile.
Tel: 56-2-2105170
Cel: 56-9-97771785
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