I think it usually means it ran out of memory
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Gonzalo Rojas Costa
Sent: Thursday, March 16, 2023 2:01 PM
To: Iglesias Gonzalez, Juan E. <jiglesiasgonza...@mgh.harvard.edu>
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] CT and mri_synthsr
External Email - Use Caution
Dear Juan:
I tested mri_synthsr using three different CT images using the threshold (80
value) that you told me some days ago. The first works ok, but with the other
2, I got the following error:
developer@developer-VirtualBox:~$ mri_synthseg --i
/home/developer/Documents/OAS31367/sub-OAS31367_sess-d0142_run-01_CT_0_80.nii.gz
--o /home/developer/Documents/OAS31367 --cpu
SynthSeg 2.0
using CPU, hiding all CUDA_VISIBLE_DEVICES
using 1 thread
predicting 1/1
Killed
What does "Killed" mean? Any log file?
Sincerely,
Gonzalo Rojas Costa
Department of Radiology
Clínica las Condes
Lo Fontecilla 441, Las Condes, Santiago, Chile.
Tel: 56-2-2105170
Cel: 56-9-97771785
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