External Email - Use Caution Dear all,
I am planning to run the thalamic segmentation (as implemented on FreeSurfer 7.1). The data has been already preprocessed with FreeSurfer 5.3, but I want to rerun the recon step on the newer FreeSurfer version. My question is, which recon output images does the thalamic segmentation use as input? It would make a considerable difference for us if we could only rerun up to e.g. the normalization instead of the whole recon (e.g. to get the aseg.mgz file) in FreeSurfer 7. Sincerely, Verónica
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