On 12/20/2022 12:22 PM, James Brown wrote:
External Email - Use Caution
Dear Freesurfer experts,
I have 2 questions about the command mri_glmfit and I appreciate your
help.
1- Are there any settings or flags that can be used in mri_glmfit to
restrict statistical comparison of surface based analysis to specific
ROIs rather than whole brain analysis. I would like to show the
difference on the brain surface in lobes rather than in sub lobar labels.
You can create a mask or label and feed it into mri_glmfit with --mask
or --label
2- I understand that the flag "--table" in command mri_glmfit allows
for feeding spreadsheets instead of images. Can we restrict the number
of columns in this spreadsheet to 8 columns for lobs (frontal,
temporal, occipital and parietal) left and right? Also, is there any
way to generate a statistical map from the spreadsheet statistics?
Remove the columns you don't want?
Thank you and happy holidays :)
James
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