Dear FreeSurfers, I have been trying to get SynthSR up and running and have come to the realisation there is a conflict with the current tools and the new apple chips (macOS Monterey, Apple M1 chip, 16GB).
I have tried the workaround via this thread on the mailing list to no avail (https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg73091.html). I then tried to install homebrew, conda, and run a virtual environment which allowed me to download tensorflow. The steps I followed with comments are attached. However, now there is an issue when calling mri_synth as follows: File "/Applications/freesurfer/dev/python/scripts/mri_synthsr", line 18, in <module> import tensorflow as tf ModuleNotFoundError: No module named 'tensorflow' I am not sure if there is a disconnect in where I have installed tensorflow such that mri_synthsr is unable to locate it. If anyone has found a workaround for this they would be willing to share it would be greatly appreciated! Thanks, Annabel Annabel Sorby-Adams, PhD Fulbright Postdoctoral Research Fellow Department of Neurology Massachusetts General Hospital Lunder 6 55 Fruit Street, Boston MA https://www.massgeneral.org/ Harvard Medical School https://hms.harvard.edu/ E asorby-ad...@mgh.harvard.edu T +1 617 251 6465
SynthSR M1 Startup
Description: SynthSR M1 Startup
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