On 11/8/2022 11:27 AM, Addison, Reuben wrote:
Just as a quick verification and follow up using
1. Specifying the number of components eg. if I want 5 -nuisreg the
various components I want to regress out “-comp 6 – comp 7 comp 8
comp 9
not sure what you mean here. The format is -nuisreg filename Ncomponents
1.
2. Also just a follow up, how do I go ahead and run an ICA instead of
the regular connectivity analysis
I don't have ICA in fsfast
*From: *freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve
<dgr...@mgh.harvard.edu>
*Date: *Tuesday, November 8, 2022 at 9:02 AM
*To: *freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
*Subject: *Re: [Freesurfer] acompcor in fsfast
When you run fcseed-sess, specify -pca instead of -mean. When you run
mkanaysis-sess, specify the number of components you want when specify
-nuisreg
On 10/26/2022 6:29 PM, Addison, Reuben wrote:
Hi,
I am running resting State functional connectivity and I want to
run everything in freesurfer and fsfast.
I wanted to know is it is possible to run
acompcor in fsfast. If so, how do I go about it.
Thanks.
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