are you talking about the whole hippo seg? That will have some WM in it.
You can also try the hippo subfield segmentation which will give you a
more refined segmentation separating GM and WM.
On 11/7/2022 11:16 AM, Jun Yeon Won wrote:
External Email - Use Caution
Dear Freesurfer experts,
I have a question about hippocampal segmentation. For the hippocampal
mask after completing recon-all, is it purely gray matter or does it
also include some aspects of white matter and others? Please advise.
Best,
JW
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