I sent a question earlier on but I do don’t think I was clearer the first time.
I am trying to do a distortion correction using (epidewarp.fsl) epidewarp.fsl \ --mag mag.nii.gz \ --dph dphase.nii.gz \ --tediff YOUR_TE_DIFF --esp YOUR_ESP \ --vsm bold/b0dcmap.nii.gz The issue we collected two field maps one in the AP direction and one in the PA direction (hence I have two different mag and phase volumes). I am not quite sure how if I should create two different maps and keep them in my bold folder for my FSFAST pipeline
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