External Email - Use Caution Hello everyone,
I am trying to display my lesion map I created in Matlab on a cortical surface, and am getting the following error: developer@developer-VirtualBox:~$ mri_vol2surf --mov rReslice_Combined_roi_meanRD.nii --mni152reg --trgsubject fsaverage --hemi lhrh --out lh_spm.mgh --projfrac-max 0 1 .1 srcvol = rReslice_Combined_roi_meanRD.nii srcreg = /usr/local/freesurfer/7.2.0/average/mni152.register.dat srcregold = 0 srcwarp unspecified surf = white hemi = lhrh trgsubject = fsaverage surfreg = sphere.reg ProjFrac = 0.5 thickness = thickness reshape = 0 interp = nearest float2int = round GetProjMax = 1 INFO: float2int code = 0 Done loading volume INFO: This REGISTER_DAT transform is valid only for volumes between COR types with c_(r,a,s) = 0. Input reg is register.dat -------- original matrix ----------- 0.99753 -0.00732 0.01760 0.95709; -0.01296 -0.00926 0.99706 -17.81596; -0.01460 -1.00094 0.00244 -18.54964; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Reading surface /usr/home//fsaverage/surf/lhrh.white error: No such file or directory error: MRISread(/usr/home//fsaverage/surf/lhrh.white): could not open file error: No such file or directory error: mri_vol2surf: could not read surface /usr/home//fsaverage/surf/lhrh.white Could anyone help me fix this? I am very new to this software and need to have this results ready for my supervisor if possible! Thank you, Rachel
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
