what happens if you run
mri_info lh.CCn_band.Seed1_20220314.V1.13subjs.mgh
On 5/3/2022 11:54 AM, Zhang, Fan wrote:
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Hello Everyone,
I am trying to run mri_surf2surf. But I got some errors saying "no
such file or directory" while in fact there are files in the pathway.
I was able to run this previously, so I am not sure if this is
relevant to the recent upgrade of the Mac operation system (12.2.1).
My FreeSurfer version is (Darwin-OSX-stable-pub-v6.0.0-2beb96c). Does
anyone know how to resolve this?
Thank you so much for the help!
Fan
mri_surf2surf --hemi lh --s fsaverage5 --sval
lh.CCn_band.Seed1_20220314.V1.13subjs.mgh --fwhm 13 --tval
lh.CCn_band.Seed1_20220314.V1.13subjs.13.mgh
sysnameDarwin
hostname Hans-iMac-Pro.local
machinex86_64
userfanzhang
srcsubject = fsaverage5
srcval= lh.CCn_band.Seed1_20220314.V1.13subjs.mgh
srctype=
trgsubject = fsaverage5
trgval= lh.CCn_band.Seed1_20220314.V1.13subjs.13.mgh
trgtype=
srcsurfreg = sphere.reg
trgsurfreg = sphere.reg
srchemi= lh
trghemi= lh
frame= 0
fwhm-in= 0
fwhm-out= 13
label-src= (null)
label-trg= (null)
OKToRevFaceOrder= 1
UseDualHemi = 0
Reading source surface reg
/Applications/freesurfer/subjects/fsaverage5/surf/lh.sphere.reg
Loading source data
MRIallocSequence(0, 0, 0, 0): bad parm
No such file or directory
Segmentation fault: 11
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