Yes, same command
On 4/17/2022 10:24 PM, Alexopoulos, Dimitrios wrote:
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Can someone confirm?
Thx.
Jim
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Alexopoulos,
Dimitrios
*Sent:* Tuesday, April 12, 2022 3:24 PM
*To:* Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
*Subject:* [Freesurfer] rerunning on 7.2 with edited brainmask using
hi-res
** External Email - Caution **
* External Email - Use Caution *
We are running some hi-res 0.8mm3 isotropic data through FS 7.2 using
the following command.
*recon-all -s subj -all –hires*
**
We are adding back brain which has been removed by the masking process
by cloning the T1/brainmask images in freeview and adding back voxels.
A revised brainmask.mgz is saved.
Can/should the same command be used to rerun using hi-res data?
Jim
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