External Email - Use Caution Oops, forget about the log file. Here it is
------------------ Original ------------------
From:
"xuan"
<pearl940...@foxmail.com>;
Date: Wed, Dec 15, 2021 08:28 PM
To: "freesurfer"<freesurfer@nmr.mgh.harvard.edu>;
Subject: nu_correct error
Dear FreeSurfer Experts,
I am attempting to recon-all for my one subject for testing on my lab server.
However, I get following error:
ncopen: filename "./tmp.mri_nu_correct.mni.13492/nu1.mnc": Not a netCDF file
miopen: MINC package entry point
Error opening ./tmp.mri_nu_correct.mni.13492/nu1.mnc
mincRead(): error reading volume from file
./tmp.mri_nu_correct.mni.13492/nu1.mnc
$Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $
reading from ./tmp.mri_nu_correct.mni.13492/nu1.mnc...
And here is the relevant information:
(1)FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
(2)Platform: Linux node-1-3 4.4.0-62-generic #83-Ubuntu SMP Wed Jan 18 14:10:15
UTC 2017 x86_64 x86_64 x86_64 GNU/Linux
(3)log file: please see attached file.
Thanks for the help!
Best,
Xuan
Xuan Bu, Ph.D.
State Key Laboratory of Cognitive Neuroscience & Learning
Beijing Normal University
Email: pearl904...@foxmail.com
Webpage:
http://secure-web.cisco.com/1sAYTPWqEOYnQckeJw_qP7iUC93VX2nG1YJZE_-U3zUgEnaO1RIEM5v0mRR5PxiAxrgR0i5XaUCJV8M4vcNAHOYih3hxz8Rv3vR2_7FAy_tLV5fTgby4KYiAbQ4kja1VZhTAEl-XLAbvd4o7jqGw3tRGnGQDbjuTYrnt2Tign-0AeRarhLs4-3ZUFoq-MSTEoKdswEca-CtpGz3eRjnizhfZXaEBNW1kaBrKNCiyDzqvzA17WfglQP-wbWoEcpeHAzHSRHYet1vaf_6tDF7SqcT1Zms_SJl1_Di7B2DhzY9no9u1zCa75MxBK0M1Rsjq7zkaR2JyvCsrXr5RYmfJ2gQ/http%3A%2F%2Fhelab.bnu.edu.cn%2Fxuanbu%2F
recon-all.log
Description: Binary data
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