External Email - Use Caution What do you mean when you say "with the original T1"? The file mri/T1.mgz? Or non-conformed files (like the raw DICOMs, raw NIFTI, or mri/orig/001.mgz)?
Best, Tim -- Dr. Tim Schäfer Postdoc Computational Neuroimaging Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany > On 11/12/2021 12:23 PM Alberto Del Cerro Leon <bertocer...@gmail.com> wrote: > > > External Email - Use Caution > > Hello Freesurfer team, I did a white matter atlas from surface annot with > mri_aparc2aseg. However, when I use this atlas in comparison with the > original T1 I have observed that both images don't share the transformation > matrix. Do you know how I could I fix this issue? > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/195EwcIO_ZL3iPE92ltdkl8Yu0XaXnGBDLLKz2Z45jVqVclXk2OQuRbFJg_kqAujSOW_EuEu8PBcDhcmfBa30-6SJNnrXeF_tQpDElR7ZVOw7nABpH8sATLDiDpLwmWABDP6_5cSrQECDjn3M2n-gGmf3WFKDE_9bl0iPsc3WBGJGsiIYpkmsf1QiToMYYN3kGAvti2L5fu2XZbacmrxbG_KRcx6Fp0kv-suveuz_VG_NttbfSDoYGqMHoEra44u-fMpyglU_JeGfRMEucMLNVKqmFnBYxPtqtjJa2EEvXZOHRVJJweliTRn37iNyO1hf/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
