It is saying that the mask lhYeo2011_7NetworksConfidence_N1000.mgzdoes
not have thee same dimensions as the input. How was it created? It must
be a surface overlay on fsaverage
On 4/26/2021 6:59 PM, Haley Park wrote:
External Email - Use Caution
Hello,
I am trying to run a correlational analysis with glm_fit on a masked
area with the code:
foreach hemi (lh)
foreach smoothness (10)
foreach meas (volume thickness)
mri_glmfit \
--y {$hemi}.{$meas}.{$study}.{$smoothness}.mgh \
--fsgd FSGD/{$study}.fsgd \
--C Contrasts/Scores_Slope.mtx\
--surf fsaverage {$hemi}\
--mask lhYeo2011_7NetworksConfidence_N1000.mgz\
--glmdir {$hemi}.{$meas}.{$study}.{$smoothness}.glmdir
end
end
end
I get the error message:
ERROR: dimension mismatch 1 between y and mask
I've also tried to run it with the .nii file found at *MailScanner has
detected a possible fraud attempt from "secure-web.cisco.com" claiming
to be*
https://surfer.nmr.mgh.harvard.edu/fswiki/CorticalParcellation_Yeo2011
<https://secure-web.cisco.com/1sTopz8rXlJoh4VSQL7P0DYm1ff7H5Crs0Qg3iAG1M6HD6Vuyjn8ViA2fDeX0A7VIH_9-GSxTfaL35eIjCKAnbUd90wxlxBlgtdz3DVFpnalWP2oV1jHapx5B4tlAXHpUA9N18syK8T_8U3eUIX2YC8P7r4l3verT5XzzxpTkHDB7Nmuh-RYY63YVpXWmTl_xCbs105PDuuWwbrTX5RfdknvxXBksPePKuZnNwqmGz-GLy8z8xYTDCYxHegxv5wG_XMQjD1PxSwhpaqG0N-mGvQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FCorticalParcellation_Yeo2011>
Any help would be appreciated!
Haley
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