Yes, it is possible, but the inferior contrasts of these sequences compared to FLAIR will likely yield noisier results.
Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Ritobrato Datta <ridatpennc...@gmail.com> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Date: Monday, April 19, 2021 at 16:54 To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] question about lesion segmentation using samseg External Email - Use Caution Hi All, I have T1w MPRAGE, T2w and PD images but I dont have FLAIR images from a Multiple Sclerosis study. Can I use samseg to segment the lesions ? Can you please suggest ? Many thanks Ri
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