External Email - Use Caution Hello,
Thanks for those suggestions. I already seem to have modified my bashrc with the same command. But I think running as root was a problem. But that's weird as earlier none of the Fs commands were executed without root. But now that seems to work. However, I still need to check with segmentHa_T1 if that works well after recon-all. Thanks for your help. On Wed, Feb 24, 2021 at 6:54 AM Horsng Junn <hsj...@gmail.com> wrote: > External Email - Use Caution > > And you seem to be running FreeSurfer as root. > Since that could complicate matters, could you run it as a normal user? > > Best, > Horsng > > On Feb 24, 2021, at 9:36 AM, Horsng Junn <hsj...@gmail.com> wrote: > > Hi Ishi, > > I'm actually not a FreeSurfer developer and this question seems beyond me, > but my googling leads to this page: > *MailScanner has detected a possible fraud attempt from > "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1F_gWok41XA7SYqJR4LbvGChFus9W0oJmhUCaOi3-zrz9C5Hhjct40ykVic16hPuJSRSUlZU5_6gudqiFJhCXr7MpRNacpj8FQmpsVVnoGn2gbiIzdNsi3m_hPKBy4kxpu3G-RVhazc9dy67G_hiiaB4vLyxMyQtGYe4KO16L0NgkDHu7-OpdDsyt3EK5FEishrBgjLslyyO4jd5jN7IDdm84wtRJkRiAgo3qH-G5segE6-u2cOiAFG5qI-A3V1wr4wGMnQ-f5fQyaufGcUSF4A/https%3A%2F%2Fwww.mathworks.com%2Fmatlabcentral%2Fanswers%2F459827-why-do-i-receive-a-glibcxx-not-found-error-on-my-redhat-or-centos-linux-machine > <https://secure-web.cisco.com/1J96FRdW9b30grp2ZKVoOToURCtWoMNvRVujwywyg_8-dnzChY7mF4O26rtAy5IRwnW_AUTLc3NyneJNA50jjEVOXpbI4dZC473KwMJggVytdgBIRr71ekxd8YXDmrZITYqzNG0A84Oz0a0_j-f9chQHRFjVJfTuTpTAPNL4Wo-w6SWdOnsVA8JRnCaR8qo75dzxZNr7BeOYrzjdQM06h8MZJkqd1LV0hvaj__eT2EaJcoJ-8aqyXpOk3lldYcJCf/https%3A%2F%2Fwww.mathworks.com%2Fmatlabcentral%2Fanswers%2F459827-why-do-i-receive-a-glibcxx-not-found-error-on-my-redhat-or-centos-linux-machine> > > which seems to suggest that you add the following to your .bashrc, > .profile or similar places and retry. > > export > LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/freesurfer/MCRv84/sys/os/glnxa64 > > Please try this and report your result. > If this doesn't work, hopefully a FreeSurfer developer would chime in. > > Best, > Horsng > > > On Feb 23, 2021, at 8:19 PM, Ishi Tandon AIB, Jaipur < > ishi.tan...@student.amity.edu> wrote: > > External Email - Use Caution > > > Hello, > > I am sorry for posting up another thread. Had an issue with subscription > so had to post again (will keep it in mind now). > > I tried that out. And that worked well. > > But there's another error that pops up after I run (attached in the > image): - > recon-all -all -s bert > > I tried the following commands in order to update libstd. > apt-get update > apt-get install libstdc++6 > But that didn't work. > > I am not able to trace the exact error. > > Thanks for the help. > > On Tue, Feb 23, 2021 at 11:56 AM Horsng Junn <hsj...@gmail.com> wrote: > >> External Email - Use Caution >> >> Hi Ishi, >> >> You apparently omitted an "n": it must be libncurses5-dev (please note >> the n after lib). >> >> And please try to keep previous correspondences intact, >> as otherwise the devs must hunt the mail archive for the detail. >> >> Best, >> Horsng >> >> >> On Feb 23, 2021, at 3:10 PM, Ishi Tandon AIB, Jaipur < >> ishi.tan...@student.amity.edu> wrote: >> >> External Email - Use Caution >> >> Hello experts, >> >> In response to the previous email about matlab installation error while >> attempting to use hippocampal subfields. >> >> I tried the following command as suggested by you :- >> >> sudo apt-get install libcurses5-dev >> >> But I get the following error :- >> >> Reading package lists... Done >> Building dependency tree Reading state information... Done >> E: Unable to locate package libcurses5-dev >> >> Also, I am using fs version 7.1.1. >> I installed freesurfer-linux-centos7_x86_64-7.1.1.tar.gz file. >> >> >> *Regards,* >> *Ishi Tandon* >> *B.Tech + M.Tech - Cognitive Neuroscience* >> *Amity University, Rajasthan* >> *Contact- +918239259846* >> *Email - ishi.tando...@gmail.com <ishi.tando...@gmail.com>* >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> https://secure-web.cisco.com/1x-1LQO4x4v-tboV8DMYVZcluPz68hZIyxVpY6bSCgbZ0KwahVjZrIQ26DMFtVXqFqddnpCpg_oZETI3tlo4gP3Rpyuiq1K_QQ5aFPeMhXTTtNvZhbjRk1qR3HA9vqia18JDSPpf_gLAj_-hQi3bCMS4674k4H6ZTL8uFhqn6gGiQykRm309Rx7tuDOhzR4fs2VAbSTU3kYaYNrvQ1C9ia4K3LMP_otxjds5k0hRv6tXnvI_CuIS67KCcAvJuKqpharbZawbIwmCEaIkSeauGNw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >> <https://secure-web.cisco.com/12RwDYgC7GK224m061UyvTyywpgQ4hZHH9uHRSfFHTRyqUtAtMnf6EhFbeCJm-UFapBw8mwMltCK02wR9Y5YyHMU69at-zAvcR6eXj2Tff20Svr4piUWKMy-B0Y99TvuwZn6LnQ21obxj5hjBrKCRm_on9Bngr7YQxSQRgERkuInxAdcv7nVoDhKA0bY1xPsZ9dAIU3x7do8bPNQn8cjhvIAt96-sQxJEYeH2mB8VVaDIdzH4VYJG6k2ucGeYWPEe/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> https://secure-web.cisco.com/1x-1LQO4x4v-tboV8DMYVZcluPz68hZIyxVpY6bSCgbZ0KwahVjZrIQ26DMFtVXqFqddnpCpg_oZETI3tlo4gP3Rpyuiq1K_QQ5aFPeMhXTTtNvZhbjRk1qR3HA9vqia18JDSPpf_gLAj_-hQi3bCMS4674k4H6ZTL8uFhqn6gGiQykRm309Rx7tuDOhzR4fs2VAbSTU3kYaYNrvQ1C9ia4K3LMP_otxjds5k0hRv6tXnvI_CuIS67KCcAvJuKqpharbZawbIwmCEaIkSeauGNw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >> <https://secure-web.cisco.com/1Cbh1Z2LLsayVc2S2uFa7p5Jcq_iiyvowEMF2-V1O8buo1ne76d9lXb6Y97prP0eG6XPS1zAqVLTec5_uftknZUBFatRowDYrMDP9-AXs7OgfLT6dGxR4-VvfeXla6dBalotTGjZ2M7-4UPhHbVyjLgm3c4wDhKSrVCGzQxVeMj4p26XmNowQpxZd2XhFMWRSPMGXEo85pXicWlf07RJLR6gx-CCLmg7GJIt6vkw1ttwzFY-UwOXGMqFufq9diAR6Lop_KZPJyEzyHSbTH-4M_A/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > > <Screenshot 2021-02-23 at 4.36.59 PM.png> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > *MailScanner has detected a possible fraud attempt from > "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1x-1LQO4x4v-tboV8DMYVZcluPz68hZIyxVpY6bSCgbZ0KwahVjZrIQ26DMFtVXqFqddnpCpg_oZETI3tlo4gP3Rpyuiq1K_QQ5aFPeMhXTTtNvZhbjRk1qR3HA9vqia18JDSPpf_gLAj_-hQi3bCMS4674k4H6ZTL8uFhqn6gGiQykRm309Rx7tuDOhzR4fs2VAbSTU3kYaYNrvQ1C9ia4K3LMP_otxjds5k0hRv6tXnvI_CuIS67KCcAvJuKqpharbZawbIwmCEaIkSeauGNw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > <https://secure-web.cisco.com/1inhjGof7Kl7HLVLSa_fHDyp9rl3PrQ8eWxuwJNOU-d0B2Tgosj_bqYHcUz-vRquMVnOGV5K1_hD482hJPLklK7mqd57NWByAmJV1VqgDtScOCOxQnjR-4tN1vAA8sQyEJsdtJEilY7PMcz3pgK-eYCy6_xKoeOEaOMJTOREflAk6CX0jgw9jAocJ9EGmKz6D3CPNev9MBog3iGH6ePK4znohOO7rPJghqqx2c5ZWxZDUuWR-zmgJ5gwKUGVW2QuXcHHGvns3l5ug4435lZcDoQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1x-1LQO4x4v-tboV8DMYVZcluPz68hZIyxVpY6bSCgbZ0KwahVjZrIQ26DMFtVXqFqddnpCpg_oZETI3tlo4gP3Rpyuiq1K_QQ5aFPeMhXTTtNvZhbjRk1qR3HA9vqia18JDSPpf_gLAj_-hQi3bCMS4674k4H6ZTL8uFhqn6gGiQykRm309Rx7tuDOhzR4fs2VAbSTU3kYaYNrvQ1C9ia4K3LMP_otxjds5k0hRv6tXnvI_CuIS67KCcAvJuKqpharbZawbIwmCEaIkSeauGNw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
