External Email - Use Caution Dear Freesurfer Community,
I ran the Freesurfer longitudinal pipeline for my subjects (1.5T, T1_data, 6 timepoints each). Now I want to continue with the longitudinal segmentation of hippocampal subfields:https://secure-web.cisco.com/1GVcN-oB6m3ReFE6G1f2L7PU8wxxvY2rraj4XNNSxZB5HgzPYSjgmfbyHU-l1H12lk8FG78mu4XNXLiISdnBMJdEBrTEzU3q4M6Z6pwHUnPwD6T8eYdfoZke4KWGvZLrYXkeCMrTZaNVkdryEDr9mn_arU6ftST3jpkRba7QtXyhdHXLVPF1SP8ZmOPKUJncEsVMBXxg4BGESpVC0WghPc_DYiLSuqwdKI7N7xfZDjcRhNYDlf4TRzpngndwBA47K5pnFDou19n1rSYQYXLFj7g/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FLongitudinalHippocampalSubfields However, when I want to run the command: longHippoSubfieldsT1.sh <baseID> I get the error message "bash: longHippoSubfieldsT1.sh: command not found" First thing I did, was checking the Freesurfer folder for the longHippo..sh file. I am using FS 7.0 but the file is not available. *So my questions: where can I get the file longHippoSubfieldsT1.sh or what else can I do to proceed with the HC subfield segmentation?* Thanks a lot for your support and looking forward to your reply. Best Xin
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