External Email - Use Caution Dear FreeSurfer experts,
I need help trying to understand how the white matter gets parcellated. I have a clinical dataset, which means that the resolution is not as research images, but it ran without a problem. I would like to measure the volume of the basal ganglia and looking at wmparc.mgz I am not sure how Freesurfer decides where a structure ends and the other one begins, because the structures are not really visible. I could upload two screenshots to show what I mean. I would really appreciate some clarification. I am using FreeSurfer 7.1.1 Thanks in advance. José -- _____________________________________________________________________ Universitätsklinikum Hamburg-Eppendorf; Körperschaft des öffentlichen Rechts; Gerichtsstand: Hamburg | http://secure-web.cisco.com/1fL7_mV1HnVXx_pK-xzWgX0hp1IPRmxfnHHvyPV6axEvIN99tKLL4rqVW9pToIfDKy-D5Sm_-qItiTvmXlbn20AApfGepiSNRG9HD4nVqJXgD2cpm1eNEqG4CGCFXEMMHwAWOIZcxSELKpiTvtfJQqS11pDN-V6wawnKdKEd7q709fQspMZAmdsiRbiCBZeGtu7JWmdef5KX1_1XQUkedRDCAP2g8fHkjXOPFtXvENEUlMlNELzQjB3No_u-xwYGRwzkYNZorfNaylUj_2e3WKw/http%3A%2F%2Fwww.uke.de Vorstandsmitglieder: Prof. Dr. Burkhard Göke (Vorsitzender), Joachim Prölß, Prof. Dr. Blanche Schwappach-Pignataro, Marya Verdel _____________________________________________________________________ SAVE PAPER - THINK BEFORE PRINTING
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