Do you mean you want to register the fMRI data to the anatomical? If so, use 
bbregister. If you've run the fMRI through FEAT, then pass the template to the 
--mov flag

On 12/1/2020 10:46 PM, Karan Desai wrote:

        External Email - Use Caution

Hi FreeSurfer developers,

I have Freesurfer anatomical data from recon-all, and pre-processed functional 
data in NifTI format from FSL and you would like to use FsFast to align that 
data. What would be the best way to do that using FsFast? Is this possible?

Thanks.



_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to