I don't understand why WM was cropped out. What command were you trying to use?
On 11/18/2020 2:39 AM, RENXI LI wrote: > External Email - Use Caution > > Hi Freesurfer experts: > > I am trying to extract the mean-time series from the functional image using > mri_segstats. However, the cerebral white matter signals were cropped out in > my functional images, and the regions that I am trying to extract signal from > are close to the cerebral white matter that some voxels at the boundary may > not contain any signals. Is there any arguments in mri_segstats that I can > use to only extract voxels that has non-zero time-series? > > Best, > Renxi > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer