External Email - Use Caution I tried to run mri_vol2surf with the following command: mri_vol2surf --src /home/neuroimage/fsl/FreeSurfer/AAL.nii --regheader MNI --projfrac 0.5 --hemi lh --out /home/neuroimage/fsl/FreeSurfer/AAL-lh.img, however i obtain an error ANALYZE FORMAT ERROR: ncols 161783 in volume exceeds 32768. How can i fix it?
El lun., 16 nov. 2020 a las 17:10, Douglas N. Greve (<dgr...@mgh.harvard.edu>) escribió: > Which MNI space? If mni152, then run recon-all on the mni152 template, > then run mri_vol2surf with --regheader mni152subjectname; also include > --projfrac 0.5. But before you do that , load the AAL atlas onto the > mni152subject with the surfaces to make sure everything aligns. You might > want to do this with the colin27 brain instead because I think that is what > the AAL atlas is defined on. > > On 11/16/2020 5:30 AM, Alberto Del Cerro Leon wrote: > > External Email - Use Caution > Hello everyone, I tried to follow your instruction about how to get the > fresurfer stats in AAL ROIs. I have an image .nii with the labels of the > AAL in the MNI space (i submit this image in the e-mail). Can I use this > image in the mri_vol2surf? If so, i suppose that this image would be the > input one, but i don't know what is registration file in the syntax of > mri_vol2surf > > Sorry for the inconvenience, Alberto > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/14IcDxKKGdMR7E66lqttkWYQlfL6BfoHtuNxe_57f-7SWwe5KfbEouUEpZiuVccd5SdT2HnGR55o6yQ2uHBPVToGgpu2n_SipDPGGYclm38rXtQ033FapCVLphv8P7caedqe4bjnpwCYYeNiaN7wR5m_f48m45xm3zmDjTEAwSaGjS8xhr6_dpSuo00tbSCSAChx4qSAIcbfHAflDo32LlIaEBwDPDOvNh6uFzJYHCvXvokGb0x9eyPjhrHfFZE_DMVozizVxfd-sWRnX0QxFwA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
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