It looks like the image darkens a lot at the top. Try putting control
points in the WWM near the start of the gyrus. make sure they are truly
in WM!
On 10/25/2020 9:03 PM, Alexopoulos, Dimitrios wrote:
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Any comments from FS users to best best tackle these manual edits?
Jim
Get Outlook for Android <https://aka.ms/ghei36>
------------------------------------------------------------------------
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Alexopoulos,
Dimitrios <dimitriosalexopou...@wustl.edu>
*Sent:* Tuesday, October 20, 2020, 10:25 AM
*To:* Freesurfer support list
*Subject:* [Freesurfer] Freesurfer edits
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Hi freesurfer editing experts.
Below are snapshots of the brainmask, aseg and wm.mgz for a 2 year old
run through FS 7.1.1
I’m hoping for feedback on the best way to make the relevant edits to
the three blue-circled regions.
1.In the superior regions I think control points will help to pick up
some WM to help fuill
2.In the left hemisphere medial prefrontal (gyrus rectus) regions, the
WM is overestimated. I presume removing WM voxels from the wm.mgz is
the best approach?
3.The left temporal pole region is missing GM/cortex and there really
isn’t any WM that would help with controls points or adding WM voxels.
How can I add GM to this area?
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