Do you have a /scratch folder?
Also, please send the full terminal output
On 10/2/2020 5:44 AM, Lorenzo Pini wrote:
External Email - Use Caution
Dear expert
I'm trying to perform FC seed ROI analysis through FSfast pipeline
After preprocessing I run:
selxavg3-sess -s subject1 -a fsrest.surf.lh -no-con-ok -svres
but I got the following error:
ERROR: /bin/bash:
/scratch/tp9f57a7bb_2ea1_450b_b0e8_8cdd47a2eb8b.load_nifti.m.nii: No
such file or directory
ERROR: loading
/home/user/Desktop/test/subjects/subject1/fsrest/001/fmcpr.sm5.self.lh.nii.gz
as analyze
ERROR: attempting to read
/home/user/Desktop/test/subjects/subject1/fsrest/001/fmcpr.sm5.self.lh
------------------------------------------
ERROR: fast_selxavg3() failed\n
Moreover, I'm a bit confused how to compute whole brain seed-ROI
surface map, using a pre-specified seed ROI created in orig.mgz space
(sphere 5mm)
Thanks in advance,
Lorenzo
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
