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Hello FreeSurfer Developers,

I have a technical question for which I have not yet found the answer.
First, I am running FreeSurfer stable-pub-v6.0.0-2beb96c on CentOS 7.

Now to the question: is there a way to apply, say, a logarithmic
transformation vertex-wise? For example, while doing a whole-brain analysis
for cortical thickness with mri_glmfit it would calculate everything with
the logarithmic value instead of mm.

If this is not implemented, do you have an idea of how I could achieve
this? Perhaps extracting the matrix with the values of each vertex and
reading it in Matlab?

Thanks in advance.

José
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