Hi Colleen, The manual editing option has not yet been added to the pipeline. Best, Lilla
On Wed, 22 Apr 2020, COLLEEN PLETCHER wrote: > > Hello. I am working with the infant Freesurfer pipeline. I have noticed that > some of our subjects may need to be manually edited, and then run through the > pipeline again. However, when I try to > do an infant_recon_all command combined with something like autorecon2-wm, I > am getting an error that says the command cannot be found. Are there any > commands specific to infant Freesurfer that > can be used in combination with manual edits? Thanks! > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
