In v7, fs_time runs by default to keep track of exec time and resources
used. You can turn it off by setting the FS_TIME_ALLOW env var to 0
On 4/16/2020 5:03 PM, Renner, Brian wrote:
External Email - Use Caution
Hello all!
A cautionary tale between versions 6.0.0 and 7.0.0. I was running
recon-all as I was with version 6.0.0 and found that my runs would
fail on our hpc after failing to find /usr/bin/time. This would leave
it in "is-running" state. I am currently awaiting the installation of
the standalone /usr/bin/time on our server and will run recon-all to
see if this resolves the issue. Attached is the full log, ending with
the hard exit error.
Best.
BR
**--*
*
*Brian Renner, MD*
*Research Associate, Neurology *
brian.ren...@cshs.org <mailto:brian.ren...@cshs.org>
*Cedars-Sinai*
127 S. San Vicente Blvd, Suite A6600 : Los Angeles CA 90048
office 310-423-1589 : mobile 310-658-3492 : cedars-sinai.org
<https://www.cedars-sinai.org/>
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