External Email - Use Caution
I should have said at the end for installation under $HOME to set,
$ export FREESURFER_HOME=$HOME/freesurfer
- R.
fsbuild March 3, 2020 at 15:39
External Email - Use
Caution
Hello Ben,
For packages to install, see the following wiki page,
https://surfer.nmr.mgh.harvard.edu/fswiki/BuildRequirements
Usually to expand the freesurfer *.tar.gz archive under /usr/local, you would
need sudo/root privileges, e.g.
$ cd /usr/local$ sudo tar
zxpf freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz…... output
deleted
- and you would end up with /usr/local/freesurfer and in turn do
$ export FREESURFER_HOME=/usr/local/freesurfer
But if you don’t have sudo privileges, e.g., it does not work to do$ sudo touch
/usr/local/foo$ sudo rm /usr/local/foo
-
then you may want to consider putting freesurfer under your $HOME
directory or somewhere you have permission to write files w/o needing to
use sudo, e.g.,
$ cd $HOME$ tar
zxpf freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz$ export
FREESURFER_HOME=$HOME
- R.
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https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
