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Hi experts,
I am running the following command to create de average subjecto with
Freesurfer v6.0:
make_average_subject --out my_avg_subject --fsgd fsgd.txt
Then, I want to do surface analysis with the thickness of each subject
projected onto my_avg_subject. I would like to know if it is correct
to run these commands before that statistical analysis:
surfreg --s s_001 --t my_avg_subject --o
my_avg_subject.sphere.reg
mris_preproc --fsgd nfsgd.txt --target my_avg_subject
--surfreg my_avg_subject.sphere.reg --meas thickness --srcfmt curv
--hemi [l/r]h --out [l/r]h.fsgd.mgh
Finally, I would use "[l/r]h.fsgd.mgh" file to do the thickness
surface analysis.
Is it correct? Should I run surfreg and use the output in
mris_preproc?What is the advantage?
Thank you very much!Marina-
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