External Email - Use Caution Thank you for the prompt answer! *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park *ddcc2...@gmail.com <ddcc2...@gmail.com>* 443-254-6298
On Tue, Jul 30, 2019 at 9:18 AM Iglesias Gonzalez, Eugenio < e.igles...@ucl.ac.uk> wrote: > External Email - Use Caution > > Dear Daniel, > > Such a script doesn’t exist yet (it’s in the to-do list). The reason why > it’s not a straightforward extension of segmentHA_T1.sh is that resampling > the anisotropic T2s to a common space is not a good idea, given the > differences in orientation. There are ways of getting around this problem; > I just haven’t found the time to do it, yet… > > Cheers, > > /Eugenio > > > > -- > > Juan Eugenio Iglesias > > Senior research fellow > > CMIC (UCL), MGH (HMS) and CSAIL (MIT) > > http://www.jeiglesias.com > > > > > > *From: *<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Daniel > Callow <ddcc2...@gmail.com> > *Reply-To: *Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> > *Date: *Monday, 29 July 2019 at 21:48 > *To: *Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> > *Subject: *[Freesurfer] segmentHA_T2.sh longitudinal version? > > > > * External Email - Use Caution * > > Hello, > > > > I have recently used segmentHA_T1_long.sh and was pleased with the > segmentation results. However, I now have a longitudinal data set that has > additional T2 high-resolution scans of the hippocampus as well as T1's. I > know there is a segmentHA_T2.sh script to incorporate these types of scans. > However, there doesn't seem to be a longitudinal version for this. Is this > something that is being worked on? Or is there another reason that T2 > should not be used with longitudinal analysis? > > > > Thank you for any advice you can provide, > > > > *Daniel Callow* > > *PhD Student, Neuroscience and Cognitive Science* > > Exercise for Brain Health Lab > > University of Maryland, College Park > > *ddcc2...@gmail.com <ddcc2...@gmail.com>* > > 443-254-6298 > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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