Hi Vin

are you sure you have space on that disk? Can you run:

mri_info /home/Downloads/reorient/test.nii
mri_info /media/results/mri/orig/001.mgz ls -l /media/results/mri/orig/001.mgz /media/results/mri/rawavg.mgz

and send us the results?

cheers
Bruce

On Thu, 25 Jul 2019, vin rasa wrote:


        External Email - Use Caution        

Please also find recon-all.log file.

Thanks!

On Thu, Jul 25, 2019 at 6:50 AM vin rasa <vimr...@gmail.com> wrote:
      Dear Freesurfer experts,
Greetings!


In the first minute of recon-all, we are getting following error:

mghRead(/media/results/mri/rawavg.mgz): could not read 262144 bytes at
slice 0



T1 data type is int16, data type 4 (looked using fslinfo) 

Looking forward to have your input!

Thank you so much,
Kind regards


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