can you clarify what you mean? What 68 surfaces do you mean? And what do
you mean by CNR of a surface?
On Wed, 3 Apr 2019, neuroimage analyst wrote:
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Hi,
We were interested in measuring CNR of each of the 68 surfaces in
Desikan-Killany atlas and compare
between the groups to verify if our results are being biased by CNRs in the
group?
I came across mri_cnr and mris_ms_surface_cnr binaries in the FreeSurfer tools
and were wondering
how to loop it through each subject in the subject_list.txt file (each column
in subject_list.txt is
the subject id) so that we get a text file (similar to ?cortical thickness txt
file generated using
aparcstats2table) that has # of subjects * # of regions txt file and the
entries within each matrix
cell is the CNR value corresponding to surface X of Subject Y.
We will greatly appreciate any help or pointers regarding this.
Thanks
Regards
--VM
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