p.s. you can see this in the log file:
Image information
RunNo 0
SeriesNo 1
ImageNo 2
NImageRows 512
NImageCols 512
NFrames 1
SliceArraylSize 3
IsMosaic 0
ImgPos 130.0000 -0.0000 130.0000
VolRes 0.5078 0.5078 9.6000
VolDim 512 512 3
Vc -1.0000 -0.0000 0.0000
Vr -0.0000 -0.0000 -1.0000
Vs -1.0000 -0.0000 0.0000
VolCenter -14.4000 -0.0000 0.0000
TransferSyntaxUID 1.2.840.10008.1.2.1
syou should never have a column (or row) of all 0s
On Tue, 19 Mar 2019, Z
Hessam wrote:
External Email - Use Caution
Hello FreeSurfer Developers,
I,m attempting to convert my dicom files to *.mgz, with command line in below:
$ recon-all -i /data/14ZOGOO/1.dcm -autorecon1 -subjid d14zogoo
but it exits with error and the recon-all.log file is attached.
why this error occur and what should I do to solve it?
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