no idea. If you want to use tbss, why not use FSL to do the dti analysis from the start?
On 2/26/19 10:27 AM, Daniel Callow wrote: > > External Email - Use Caution > > Hello, > > I am working through dt_recon troubleshooting (One subjects > registration to anatomical is skewed leading to incorrect masking of > that subjects FA image). I would like to use the dt_recon's FA outputs > and input them into FSL's tbss pipeline. My question is are there any > steps I should take converting or modifying the FA images so they are > compatible with the tbss pipeline. My intention was to take the > dt_recon fa or fa-masked into the tbss_1_preproc command? > > Are there any considerations I should take into account? > > Best > *Daniel Callow* > /PhD Student, Neuroscience and Cognitive Science/ > Exercise for Brain Health Lab > University of Maryland, College Park > _ddcc2...@gmail.com <mailto:ddcc2...@gmail.com>_ > 443-254-6298 > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
