wow, that looks pretty bad. Can you send us the recon-all.log (or upload the entire subject and we will investigate)? On Tue, 19 Feb 2019, mara alves wrote:


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Hi there,

I ran the recon -all command in two samples, one of young participants and 
another of older
subjects.

The segmentation worked well for young participants, however it seems that for 
older participants
the white.pial segmentation it is being done incorrectly. I believe it is 
segmenting the gray matter
instead (please see the pics attached).

Best,
Mara

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