External Email - Use Caution
Hi Dr Greve,
Thanks for the comment:
I ran vertex wise analysis on subcortical regions, I corrected the analysis for
multiple comparison using "mri_glmfit-sim". One of the created files after
correction for multiple comparison is "grf.th1.3.pos.sig.cluster.mgh"
I would like to move this file to the cerebellum surface? I used the command
mri_vol2surf --mov grf.th1.3.pos.sig.cluster.mgh --hemi lh --surf white
--projfrac 0 --mni152reg --o lh.grf.th1.3.pos.sig.cluster.mgh
I want to project "grf.th1.3.pos.sig.cluster.mgh" on the cerebellum surface (I
already created surfaces to the cerebellum using the command mri_tesselate),
but it seems that he command mri_vol2surf is designed to move files to the
cerebral surfaces not to the cerebellum surfaces. How can I modify the command
to project statistical maps on specific structural surfaces such as cerebellum
and brain stem?
Thanks
John
Can you be more specific about how mri_vol2surf failed? Eg, command line,
terminal output, reason you think it did not work
On 1/21/19 10:47 AM, john Anderson wrote:
>
> External Email - Use Caution
>
> Dear FS experts,
> I have a statistical map from the output of a surface based analysis
> in subcortical regions. This statistical map shows significant
> difference between the groups in the cerebellum cortex.
>
> I reconstructed the cerebellar surfaces using the command
> "mri_tessalte). Now, I would like to map the volumetric statistical
> map to the constructed cerebellum surfaces. How can I do that? I tried
> the command "mri_vol2surf" in many different wants but it didn't work!
>
> Thanks for any guidance!
> John
‐‐‐‐‐‐‐ Original Message ‐‐‐‐‐‐‐
On Monday, January 21, 2019 10:47 AM, john Anderson
<john.ande...@protonmail.com> wrote:
> Dear FS experts,
> I have a statistical map from the output of a surface based analysis in
> subcortical regions. This statistical map shows significant difference
> between the groups in the cerebellum cortex.
>
> I reconstructed the cerebellar surfaces using the command "mri_tessalte).
> Now, I would like to map the volumetric statistical map to the constructed
> cerebellum surfaces. How can I do that? I tried the command "mri_vol2surf" in
> many different wants but it didn't work!
>
> Thanks for any guidance!
> John
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