Do you have access to the stderr output from this process? On 1/3/19 3:55 PM, Maksimovskiy, Arkadiy wrote: > > Dear Experts, > > I was wondering if someone might be able to help diagnose a recon error. > > I used the following command to initiate recon: > > recon-all -subject RMD002 -i > /ncf/anl/anl01/MultiMode/Data/structural/T1_MEMPRAGE_5_RMD002_e1.nii > -T2 /ncf/anl/anl01/MultiMode/Data/structural/T2_SPACE_6_RMD002.nii > -T2pial -3T -all > > The recon log indicates an error: recon-all -s RMD002 exited with ERRORS > > Attached is the log file. I used grep to search through it for > “failed” or “error”, but am unable to see any indices of errors, other > than this message at the bottom of the log. > > I would love to hear any info for what might have gone wrong. > > Thank you for all your help, > > Arkadiy > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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