Dear Experts,
I am planning to run "recon" using T1 and T2 images, and was wondering if you wouldn't mind confirming whether this is the right command with recon: recon-all -s ${subject} -i T1.nii -T2 T2.nii -all I have seen a slightly different variation in the mailing archives, but this was years ago, and I believe that mine is consistent with the Wiki. Additionally, should the -T2pial flag be included? Thank you for your help, Arkadiy -- Arkadiy L. Maksimovskiy, Ph.D. <https://www.researchgate.net/profile/Arkadiy_Maksimovskiy2> Postdoctoral Research Fellow McLean Imaging Center, McLean Hospital Department of Psychiatry, Harvard Medical School
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer