See whether this helps. You will have to go in the opposite direction, but the idea is the same https://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat
On 11/12/2018 02:00 PM, Min Zhang wrote: > > External Email - Use Caution > > Dear Freesufer team: > > I have marked bounding box in the original DICOM File, and applied > autorecon1 to do the skull striping for the images. I want to transfer > the bounding box to the skull stripped output. How can I get the > coordinates transformation matrix between the input and skull stripped > output. Many Thanks! > > Best > Min > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
