External Email - Use Caution Hi again,
sorry. Please find attached the recon-all.log. I´m not sure how to check the input to watershed.
recon-all.log
Description: Binary data
Thanks, Boris > Am 11.10.2018 um 18:55 schrieb Bruce Fischl <fis...@nmr.mgh.harvard.edu>: > > Hi Boris > > can you check to make sure that the input to the watershed looks ok? Also, in > general it is a lot easier for us to help if you send us the full command > line and screeen output and attach the recon-all.log > > cheers > Bruce > > > On Thu, 11 Oct 2018, Boris Rauchmann wrote: > >> External Email - Use Caution >> When I run recon-all i get the follwing error message: >> mri_watershed Error: >> GLOBAL region of the brain empty ! >> Linux 02f92500bcfb 4.15.0-36-generic #39~16.04.1-Ubuntu SMP Tue Sep 25 >> 08:59:23 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux >> recon-all -s sub-XYZ exited with ERRORS at Thu Oct 11 15:10:22 UTC 2018 >> The .nii file looks fine. Can someone help me with this? >> Best, >> Boris > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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