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Dear experts,

Is there any way I can calculate the cortical thickness based on gray matter 
and white matter binary images from other software. 
I mean I have a image in native space with white matter voxels labelled as 10 
and gray matter voxels labelled as 5.
Is there any way I can manage to calculate the cortical maps from this image 
using freesurfer?

Thanks a lot!

Best,

Yuanchao Zhang



yuanchao.zha...@gmail.com
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