You cannot use PET images as input to FreeSurfer. It must be a T1-weighted MRI. doug
On 08/04/2018 03:16 AM, Yubraj Gupta wrote: > > External Email - Use Caution > > Hello Freesurfer Developers, > > I'm attempting to compute RECON-all for PET images, for some image I > am getting the stats folder with no error, but for some of my subjects > I get the following error when recon-all is processing > ERROR: mrisAddEdge: too many edges (254) > XL defect detected... > Large defect found - not a problem, but a curiosity > No such file or directory > > I've searched the list and no similar errors have been reported. Does > anyone have any thought on how to troubleshoot this one? Also, I've > attached the recon-all.log with ADNI file in case it's of any use. > 1) Freesurfer version: freesurfer-linux-centos7_x86_64-dev- > 20180725-1793f7a > 2) platform: centos-release 7centos > 3) unmae -a: Linux tars 3.10.0-693.11.1.el7.x86_64 #1 SMP Mon Dec 4 > 23:52:40 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux > 4) recon-all.log: see attached > 5) subject attached: see attached > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
