Each entry in the TPEF is the time in seconds of the frame you want to exclude. So, time=480 means frame 600 > your number of time points.
On 07/18/2018 04:42 PM, Nasiriavanaki, Zahra wrote: > > 0.8 > > > *Zahra (Mona) Nasiriavanaki* > > Postdoctoral Research Fellow > > Martinos Center for Biomedical Imaging > > Massachusetts General Hospital > > 149 13th Street, 149-2615 > > Charlestown, MA, USA, 02129 > > > > ------------------------------------------------------------------------ > *From:* freesurfer-boun...@nmr.mgh.harvard.edu > <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve > <dgr...@mgh.harvard.edu> > *Sent:* Wednesday, July 18, 2018 2:38:50 PM > *To:* freesurfer@nmr.mgh.harvard.edu > *Subject:* Re: [Freesurfer] TPEF error > what is your TR? > > On 07/18/2018 04:03 PM, Nasiriavanaki, Zahra wrote: > > > > Hi > > > > > > I am running the connectivity analysis (seed to whole brain), and when > > I run selxavg command, I get this error: > > > > > > ERROR: time points in > > > /autofs/space/oprah_001/users/jvm27/looming/all_subjects/liur_loom2_c_sdp/rest/025/TPEF.txt > > exceed nframes (488) > > > > and the time points do not exceed the number of frames! It is > > happening for most of my subjects. > > > > I am copy ing my tpef file for this run. > > > > Could you please let me know how I should solve it? > > > > > > Thanks > > > > Mona > > > > > > TPEF file for run 025: > > > > 6 > > 36 > > 50 > > 61 > > 62 > > 74 > > 106 > > 204 > > 245 > > 246 > > 295 > > 297 > > 298 > > 311 > > 312 > > 321 > > 322 > > 323 > > 324 > > 325 > > 330 > > 352 > > 370 > > 378 > > 383 > > 384 > > 385 > > 387 > > 396 > > 397 > > 398 > > 424 > > 431 > > 439 > > 441 > > 442 > > 477 > > 478 > > 479 > > 480 > > > > > > > > > > > > > > > > > > *Zahra (Mona) Nasiriavanaki* > > > > Postdoctoral Research Fellow > > > > Martinos Center for Biomedical Imaging > > > > Massachusetts General Hospital > > > > 149 13th Street, 149-2615 > > > > Charlestown, MA, USA, 02129 > > > > > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
