External Email - Use Caution Hello Freesurfer developers,
I ran recon-all command to extract all subjects stats. Here I'm mainly targetting the surface area, volume, thickness and mean curve for all subjects. " recon-all -i /filepath/file/ -s /subjectid/ -all " this was the command i used. Now the problem is that I'm getting zeroes for the surface area which is parcellated from 'aparc.a2009s' and it occurred for a large number of subjects. The command for converting stats to .txt is given below: aparcstats2table --hemi lh --subjects 004 008 --parc aparc.a2009s --meas area --tablefile lh.a2009s.area.txt *l**h_G&S_frontomargin_area* *lh_G&S_occipital_inf_area* *lh_G&S_paracentral_area* *lh_G&S_subcentral_area* *lh_G&S_transv_frontopol_area* *lh_G&S_cingulAnt_area* I wanted to know the reason for getting these zeroes. Could anyone plz help me out in this regard. Thanks in advance! *Best* *Vittal*
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
