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Dear experts,
I’m visualizing a 1st level sig-map together with two specific label files
using tksurfer (Freesurfer version 6.0). I’ve extracted those labels before
using mri_annotation2label.
I would like to change the colours of the label outlines. This is probably a
very simple thing to do, but I am somehow stuck and would appreciate any help.
Here my code:
tksurfer Case01 lh inflated \
-tcl my_script.tcl \
-label-outline \
-label ${label_dir}/lh.label1.label\
-label ${label_dir}/lh.label2.label\
-o ${contrast_dir}/contrast1l/sig.nii.gz
with the .tcl file containing the following:
labl_set_color 0 0 0 255
labl_set_color 1 0 255 255
make_lateral_view
rotate_brain_x -30
redraw
Thanks for your help!
Martin
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