External Email - Use Caution El 2018-05-07 19:54, Douglas N. Greve escribió: > It will always apply it. If your data are 256 anyway, it will not have > an effect. If your data are <256, then it will have some small effects > > > On 05/03/2018 04:30 AM, JAVIER ROJO MUÑOZ wrote: >> External Email - Use Caution >> >> Hello FreeSufer developers, >> >> We're trying to have a small quality control pipeline when executing >> recon-all. As a part of this, one doubt came to us, and couldn't find >> an >> answer: >> >> Is the -cw256 flag applied always or only when the FOV is larger than >> expected? Also, when executing -autorecon1 and -autorecon2 separately, >> should we use this flag only in -autorecon1 or also in -autorecon2 and >> -autorecon3? I tried applying only to -autorecon1 and it worked >> apparently, but I don't know if I'm missing something. >> >> We're using the following version of Freesurfer: >> freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c >> >> I would be more than grateful for any help, and sorry if that might be >> a >> lame question. >> >> Sincerely, >> >> Javier Rojo Muñoz >> > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom > it is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you > in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail.
Thank you really much for the help! About the second part of the question, indeed I've reread the wiki and I must have missed the explanation about the <subj>/tmp/cw256 folder last time. Sorry for that error of me, and thank you again. Sincerely Javier Rojo Muñoz -- JAVIER ROJO MUÑOZ Universidad Politecnica de Madrid _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
